- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : U-box domain-containing protein, putative, expressed
Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os02g33590 | |
| Cluster | HCCA clusters: cluster_0057 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_33780 | No alias | e3 ubiquitin-protein ligase pub23 | 0.03 | Orthogroups_2024-Update | |
| Bradi1g68530 | No alias | ARM repeat superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Cre03.g178550 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G151204 | No alias | CYS, MET, PRO, and GLY protein 1 | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G077120.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Kfl00376_0010 | kfl00376_0010_v1.... | (at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN:... | 0.03 | Orthogroups_2024-Update | |
| MA_10430196g0010 | No alias | (at2g35930 : 192.0) Encodes a cytoplasmically localized... | 0.03 | Orthogroups_2024-Update | |
| MA_6335g0010 | No alias | "(at5g64660 : 281.0) ""CYS, MET, PRO, and GLY protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00043995-RA | No alias | (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
| PSME_00046041-RA | No alias | "(at5g64660 : 307.0) ""CYS, MET, PRO, and GLY protein... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G070500 | No alias | plant U-box 29 | 0.02 | Orthogroups_2024-Update | |
| Potri.007G110600 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.014G101100 | No alias | plant U-box 23 | 0.02 | Orthogroups_2024-Update | |
| Potri.017G135000 | No alias | ARM repeat superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.9G474100.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G441100.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G169900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g005160 | No alias | Avr9/Cf-9 rapidly elicited protein 1 | 0.03 | Orthogroups_2024-Update | |
| Solyc01g007040 | No alias | U-box domain-containing family protein (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g003000 | No alias | U-box domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | InterProScan predictions |
| BP | GO:0016567 | protein ubiquitination | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003613 | Ubox_domain | 8 | 86 |
| No external refs found! |