LOC_Os02g34260

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g34260
Cluster	HCCA clusters: cluster_0076

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16759	No alias	ethylene-responsive transcription factor erf012	0.02	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.02	Orthogroups_2024-Update
At1g77200	No alias	Ethylene-responsive transcription factor ERF037...	0.02	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.02	Orthogroups_2024-Update
At4g16750	No alias	Ethylene-responsive transcription factor ERF039...	0.03	Orthogroups_2024-Update
At4g25490	No alias	DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3]	0.02	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Bradi1g72457	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g17620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.C03619.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.D02719.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.E02969.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.F01050.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.H02264.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Brara.I01208.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G066158	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
GRMZM5G837876	No alias	ethylene-responsive element binding factor 15	0.02	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.10G067000	No alias	C-repeat/DRE binding factor 1	0.02	Orthogroups_2024-Update
Glyma.13G152000	No alias	C-repeat-binding factor 4	0.02	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.19G163900	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
HORVU2Hr1G071270.4	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os04g34970	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g11860	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g43200	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
MA_100577g0010	No alias	(at5g21960 : 112.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_1037g0020	No alias	(at1g74930 : 134.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_10431529g0030	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.04	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_8574268g0010	No alias	(at5g11590 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_900190g0010	No alias	(at1g01250 : 124.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00048384-RA	No alias	(at5g11190 : 113.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.002G039000	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Potri.002G094200	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Potri.003G077700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G081200	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Pp1s138_190V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s199_50V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s2_410V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Pp1s61_230V6	No alias	ap2 erf domain-containing transcription factor	0.01	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.1G259000.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.5G348100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G050600.2	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Solyc02g067020	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc08g007230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen09g032850	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	95	144

External Links

No external refs found!

LOC_Os02g34260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation