Solyc07g041640

Description : Growth-regulating factor-like protein (AHRD V3.3 *** A0A072US13_MEDTR)

Gene families : OG_42_0000283 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000283_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc07g041640
Cluster	HCCA clusters: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
420739	No alias	growth-regulating factor 2	0.03	Orthogroups_2024-Update
A4A49_33834	No alias	growth-regulating factor 6	0.04	Orthogroups_2024-Update
A4A49_40190	No alias	growth-regulating factor 10	0.03	Orthogroups_2024-Update
At2g06200	No alias	growth-regulating factor 6 [Source:TAIR;Acc:AT2G06200]	0.03	Orthogroups_2024-Update
Bradi1g09900	No alias	growth-regulating factor 1	0.02	Orthogroups_2024-Update
Brara.E02725.1	No alias	component *(GRF) of GRF-GIF transcriptional complex	0.03	Orthogroups_2024-Update
Brara.G01562.1	No alias	component *(GRF) of GRF-GIF transcriptional complex	0.05	Orthogroups_2024-Update
Glyma.16G007600	No alias	growth-regulating factor 5	0.03	Orthogroups_2024-Update
Glyma.17G050200	No alias	growth-regulating factor 5	0.03	Orthogroups_2024-Update
HORVU6Hr1G068370.1	No alias	component *(GRF) of GRF-GIF transcriptional complex	0.03	Orthogroups_2024-Update
MA_18836g0010	No alias	(at3g13960 : 164.0) Growth regulating factor encoding...	0.03	Orthogroups_2024-Update
PSME_00044972-RA	No alias	(at3g13960 : 158.0) Growth regulating factor encoding...	0.02	Orthogroups_2024-Update
PSME_00049513-RA	No alias	(at2g22840 : 179.0) Growth regulating factor encoding...	0.04	Orthogroups_2024-Update
Potri.013G077500	No alias	growth-regulating factor 5	0.02	Orthogroups_2024-Update
Sopen01g037310	No alias	WRC	0.04	Orthogroups_2024-Update
Sopen07g021120	No alias	WRC	0.06	Orthogroups_2024-Update
Sopen09g003930	No alias	WRC	0.04	Orthogroups_2024-Update
Sopen10g032980	No alias	WRC	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
BP	GO:0006289	nucleotide-excision repair	IEP	Predicted GO
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0030163	protein catabolic process	IEP	Predicted GO
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR014978	Gln-Leu-Gln_QLQ	11	44
IPR014977	WRC_dom	79	121

External Links

No external refs found!

Solyc07g041640

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation