1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g041830

Solyc07g041830


Description : Damaged dna-binding 2, putative isoform 1 (AHRD V3.3 *** A0A061GM96_THECC)


Gene families : OG_42_0000415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000415_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g041830
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
441738 No alias Function unknown 0.02 Orthogroups_2024-Update
At3g03170 No alias At3g03170 [Source:UniProtKB/TrEMBL;Acc:Q29PZ2] 0.03 Orthogroups_2024-Update
Brara.H01822.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G011006 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.18G045200 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
MA_9367190g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sobic.007G200100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc08g061490 No alias Damaged dna-binding 2, putative isoform 1 (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!