LOC_Os02g39220

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g39220
Cluster	HCCA clusters: cluster_0067

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g25465	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Glyma.20G132100	No alias	FRS (FAR1 Related Sequences) transcription factor family	0.03	Orthogroups_2024-Update
HORVU7Hr1G085020.9	No alias	FRS/FRF-type transcription factor	0.02	Orthogroups_2024-Update
Sopen03g040440	No alias	FAR1 DNA-binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004367	Cyclin_C-dom	240	316
IPR006671	Cyclin_N	109	237
IPR003653	Peptidase_C48_C	1440	1479
IPR018289	MULE_transposase_dom	938	1032
IPR004330	FAR1_DNA_bnd_dom	726	816

External Links

No external refs found!