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  5. Solyc07g042050

Solyc07g042050


No description available


Gene families : OG_42_0000887 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g042050
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Solyc03g046220 No alias No description available 0.03 Orthogroups_2024-Update
Solyc05g018110 No alias No description available 0.04 Orthogroups_2024-Update
Solyc05g025840 No alias No description available 0.04 Orthogroups_2024-Update
Solyc07g041130 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g042040 No alias No description available 0.04 Orthogroups_2024-Update
Solyc08g068550 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g036270 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g007470 No alias Ulp1 protease family, C-terminal catalytic domain 0.02 Orthogroups_2024-Update
Sopen04g019360 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen12g021220 No alias Ulp1 protease family, C-terminal catalytic domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!