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  5. LOC_Os02g41510

LOC_Os02g41510


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g41510
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
127390 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.02 Orthogroups_2024-Update
Brara.G02641.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01999.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G057027 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G335358 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.08G317800 No alias myb domain protein 97 0.02 Orthogroups_2024-Update
Glyma.20G047600 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_2871g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_355131g0010 No alias (at3g28910 : 186.0) transcription factor myb homologue;... 0.02 Orthogroups_2024-Update
MA_460508g0010 No alias (q7xbh4|myb4_orysa : 200.0) Myb-related protein Myb4... 0.03 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00040036-RA No alias (at5g55020 : 216.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Solyc07g006750 No alias blind-like8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!