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  5. LOC_Os02g42440

LOC_Os02g42440


Description : GEM, putative, expressed


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g42440
Cluster HCCA clusters: cluster_0016

Target Alias Description ECC score Gene Family Method Actions
At5g13200 No alias GEM-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYV6] 0.02 Orthogroups_2024-Update
Brara.B03719.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G009326 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
Glyma.20G102000 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 Orthogroups_2024-Update
HORVU1Hr1G043500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G006190.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00235_0140 kfl00235_0140_v1.1 (at5g13200 : 115.0) GRAM domain family protein; CONTAINS... 0.01 Orthogroups_2024-Update
MA_10436711g0010 No alias (at1g28200 : 249.0) VirF-interacting protein FIP1; FH... 0.02 Orthogroups_2024-Update
MA_99608g0020 No alias (at5g13200 : 141.0) GRAM domain family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00003496-RA No alias (at5g13200 : 133.0) GRAM domain family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00036937-RA No alias (at5g13200 : 189.0) GRAM domain family protein; CONTAINS... 0.02 Orthogroups_2024-Update
Pp1s12_415V6 No alias T31B5.20; GRAM domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G246800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.3G320700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g009760 No alias GRAM domain protein/ABA-responsive-like protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc07g021540 No alias GRAM domain protein/ABA-responsive-like protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen04g004130 No alias GRAM domain 0.02 Orthogroups_2024-Update
Sopen07g010950 No alias GRAM domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 110 229
No external refs found!