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  5. LOC_Os02g42690

LOC_Os02g42690


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g42690
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
A4A49_17694 No alias e3 ubiquitin-protein ligase rma1h1 0.02 Orthogroups_2024-Update
At4g03510 No alias E3 ubiquitin-protein ligase RMA1... 0.02 Orthogroups_2024-Update
Brara.A01799.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Glyma.15G073700 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G091220.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
HORVU5Hr1G011730.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Potri.011G051800 No alias RING membrane-anchor 1 0.02 Orthogroups_2024-Update
Seita.9G140300.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
evm.model.tig00001331.4 No alias (at1g19310 : 110.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 51 103
No external refs found!