LOC_Os02g43330

Description : homeobox associated leucine zipper, putative, expressed

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g43330
Cluster	HCCA clusters: cluster_0033

Target	Alias	Description	ECC score	Gene Family Method
81609	No alias	homeobox protein 16	0.02	Orthogroups_2024-Update
A4A49_23132	No alias	homeobox-leucine zipper protein athb-52	0.02	Orthogroups_2024-Update
At5g15150	No alias	Homeobox-leucine zipper protein HAT7...	0.03	Orthogroups_2024-Update
At5g53980	No alias	Homeobox-leucine zipper protein ATHB-52...	0.03	Orthogroups_2024-Update
At5g66700	No alias	Homeobox-leucine zipper protein ATHB-53...	0.02	Orthogroups_2024-Update
Bradi3g56180	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Brara.G01237.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.18G258400	No alias	homeobox protein 20	0.02	Orthogroups_2024-Update
HORVU2Hr1G092710.2	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G072810.6	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Pp1s57_194V6	No alias	No description available	0.02	Orthogroups_2024-Update
Sobic.002G189000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G163900.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0004470	malic enzyme activity	IEP	Predicted GO
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
MF	GO:0008252	nucleotidase activity	IEP	Predicted GO
MF	GO:0008253	5'-nucleotidase activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009264	deoxyribonucleotide catabolic process	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016615	malate dehydrogenase activity	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	64	118
IPR003106	Leu_zip_homeo	120	161

External Links

No external refs found!

LOC_Os02g43330

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation