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  5. LOC_Os02g44300

LOC_Os02g44300


Description : MSP domain containing protein, expressed


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g44300
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
At1g51270 No alias Vesicle-associated protein 1-4... 0.03 Orthogroups_2024-Update
Bradi3g50857 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.04 Orthogroups_2024-Update
MA_412813g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Sobic.007G044400.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Sopen08g026510 No alias MSP (Major sperm protein) domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 110
No external refs found!