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  5. LOC_Os02g44470

LOC_Os02g44470


Description : actin-depolymerizing factor, putative, expressed


Gene families : OG_42_0000295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g44470
Cluster HCCA clusters: cluster_0059

Target Alias Description ECC score Gene Family Method Actions
At3g46010 No alias Actin depolymerizing factor 1... 0.03 Orthogroups_2024-Update
Glyma.06G003900 No alias actin depolymerizing factor 5 0.02 Orthogroups_2024-Update
HORVU4Hr1G063830.8 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G100770.1 No alias actin-depolymerizing factor 0.04 Orthogroups_2024-Update
Mp2g12970.1 No alias actin-depolymerizing factor 0.02 Orthogroups_2024-Update
Potri.009G133100 No alias actin depolymerizing factor 5 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR002108 ADF-H 33 155
No external refs found!