LOC_Os02g45200

Description : dof zinc finger domain containing protein, putative, expressed

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g45200
Cluster	HCCA clusters: cluster_0145

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10722	No alias	dof zinc finger protein dof2.4	0.03	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.03	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.02	Orthogroups_2024-Update
Brara.I00633.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I00711.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Cre12.g521150	No alias	cycling DOF factor 2	0.01	Orthogroups_2024-Update
Glyma.01G183000	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.08G358100	No alias	DNA binding with one finger 2.4	0.03	Orthogroups_2024-Update
Glyma.10G173700	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.15G082400	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.17G180600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
Potri.011G055600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s12_364V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s170_42V6	No alias	f-box family protein	0.03	Orthogroups_2024-Update
Pp1s26_282V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.5G266800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G033500.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.004G284400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc04g070960	No alias	Dof zinc finger protein (AHRD V3.3 - W9S6D3_9ROSA)	0.02	Orthogroups_2024-Update
Solyc06g062520	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA)	0.03	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g022800	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen03g022580	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
CC	GO:0030014	CCR4-NOT complex	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0046034	ATP metabolic process	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	78	134

External Links

No external refs found!

LOC_Os02g45200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation