1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g45590

LOC_Os02g45590


Description : PPR repeat domain containing protein, putative, expressed


Gene families : OG_42_0009424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009424_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g45590
Cluster HCCA clusters: cluster_0099

Target Alias Description ECC score Gene Family Method Actions
Bradi3g51690 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Sobic.004G282500.2 No alias mitochondrial RNA splicing factor *(OTP43) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 443 474
IPR002885 Pentatricopeptide_repeat 553 599
IPR002885 Pentatricopeptide_repeat 481 530
IPR002885 Pentatricopeptide_repeat 371 419
No external refs found!