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  5. LOC_Os02g45710

LOC_Os02g45710


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g45710
Cluster HCCA clusters: cluster_0102

Target Alias Description ECC score Gene Family Method Actions
Brara.C02915.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update
Brara.C04006.1 No alias E3 ubiquitin ligase *(XERICO) 0.03 Orthogroups_2024-Update
Brara.G00433.1 No alias E3 ubiquitin ligase *(XERICO) 0.02 Orthogroups_2024-Update
Glyma.04G153400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G036510.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00056848-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Sobic.004G281400.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 159
No external refs found!