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  5. LOC_Os02g46100

LOC_Os02g46100


Description : RING-H2 finger protein, putative, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g46100
Cluster HCCA clusters: cluster_0090

Target Alias Description ECC score Gene Family Method Actions
172324 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_10724 No alias ring-h2 finger protein atl33 0.03 Orthogroups_2024-Update
A4A49_11165 No alias ring-h2 finger protein atl8 0.03 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.03 Orthogroups_2024-Update
At4g35480 No alias RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] 0.03 Orthogroups_2024-Update
At5g41450 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
Brara.E01886.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.K00768.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G026562 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G175400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G271100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G121400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G178400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G030900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G070640.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g64620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10106144g0010 No alias (at3g16720 : 110.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_26001g0020 No alias (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
MA_308999g0010 No alias (at1g72310 : 80.9) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
MA_611616g0010 No alias (at1g49230 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_6934973g0010 No alias (at5g01880 : 125.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
PSME_00011913-RA No alias (at3g51430 : 162.0) Although this enzyme is predicted to... 0.02 Orthogroups_2024-Update
PSME_00024216-RA No alias (at1g49230 : 130.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00054098-RA No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
Potri.001G453800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Potri.007G064400 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G025800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.02 Orthogroups_2024-Update
Solyc11g006450 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Solyc12g094690 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g017550 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen10g005680 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!