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  5. LOC_Os02g46200

LOC_Os02g46200


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g46200
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g38750 No alias transposon protein, putative, Mutator sub-class, expressed 0.03 Orthogroups_2024-Update
Solyc03g095400 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g061600 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g014510 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 537 580
No external refs found!