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  5. LOC_Os02g46440

LOC_Os02g46440


Description : expressed protein


Gene families : OG_42_0002429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g46440
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Brara.B03557.1 No alias component *(uL18m) of large mitoribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Brara.I00456.1 No alias component *(uL18m) of large mitoribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Glyma.14G006000 No alias Ribosomal L18p/L5e family protein 0.02 Orthogroups_2024-Update
LOC_Os01g15290 No alias ribosomal L18p/L5e family protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s59_287V6 No alias 50s ribosomal protein l18 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 66 180
No external refs found!