LOC_Os02g46500

Description : U-box, putative, expressed

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g46500
Cluster	HCCA clusters: cluster_0109

Target	Alias	Description	ECC score	Gene Family Method
At3g19380	No alias	U-box domain-containing protein 25...	0.02	Orthogroups_2024-Update
Bradi5g27660	No alias	CYS, MET, PRO, and GLY protein 2	0.02	Orthogroups_2024-Update
Brara.D00589.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Glyma.10G262600	No alias	plant U-box 22	0.02	Orthogroups_2024-Update
Kfl00108_0050	kfl00108_0050_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os04g34030	No alias	U-box domain-containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_10432179g0010	No alias	(at3g52450 : 121.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
MA_17715g0010	No alias	"(at1g66160 : 253.0) ""CYS, MET, PRO, and GLY protein...	0.03	Orthogroups_2024-Update
MA_415393g0010	No alias	(at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00056516-RA	No alias	(at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
Potri.017G135000	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Sobic.003G367000.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.006G075400.2	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Solyc01g080920	No alias	LOW QUALITY:U-box domain-containing protein (AHRD V3.3...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
CC	GO:0070461	SAGA-type complex	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	8	76

External Links

No external refs found!