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LOC_Os02g47360


Description : PPR repeat domain containing protein, putative, expressed


Gene families : OG_42_0006907 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g47360
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G009700 No alias endonucleases 0.02 Orthogroups_2024-Update
HORVU6Hr1G068490.1 No alias plastidial RNA splicing factor *(OTP51) 0.04 Orthogroups_2024-Update
Solyc11g066850 No alias Pentatricopeptide repeat-containing protein, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 213
IPR002885 Pentatricopeptide_repeat 512 539
IPR002885 Pentatricopeptide_repeat 476 504
IPR002885 Pentatricopeptide_repeat 371 415
IPR004860 LAGLIDADG_2 576 742
No external refs found!