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  5. LOC_Os02g48340

LOC_Os02g48340


Description : RNA recognition motif containing protein, putative, expressed


Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g48340
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
GRMZM6G570512 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
LOC_Os06g11730 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00020201-RA No alias (at1g20880 : 201.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 39 83
No external refs found!