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  5. LOC_Os02g49370

LOC_Os02g49370


Description : histone-like transcription factor and archaeal histone, putative, expressed


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g49370
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
Sobic.002G369800.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Solyc09g074760 No alias Nuclear transcription factor Y protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen00g008690 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update
Sopen12g002080 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 37 100
No external refs found!