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  5. LOC_Os02g49440

LOC_Os02g49440


Description : dof zinc finger domain containing protein, putative, expressed


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g49440
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
A4A49_20554 No alias dof zinc finger protein dof2.1 0.03 Orthogroups_2024-Update
Bradi2g19930 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H00201.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Glyma.02G062700 No alias OBF binding protein 1 0.03 Orthogroups_2024-Update
Glyma.03G258800 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.07G012100 No alias DOF zinc finger protein 1 0.02 Orthogroups_2024-Update
Glyma.11G140200 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G044560.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Potri.004G046100 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.011G055600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 44 99
No external refs found!