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  5. LOC_Os02g51070

LOC_Os02g51070


Description : starch synthase, putative, expressed


Gene families : OG_42_0003564 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g51070
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
Brara.E03617.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G038420.8 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
LOC_Os10g30156 No alias starch synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.017G084100 No alias starch synthase 2 0.03 Orthogroups_2024-Update
Seita.1G318200.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.05 Orthogroups_2024-Update
Seita.9G243600.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Sobic.001G239500.2 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.004G238600.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 204 446
IPR001296 Glyco_trans_1 505 650
No external refs found!