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  5. Solyc07g043130

Solyc07g043130


Description : Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT2G30520.1)


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g043130
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
141980 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
156140 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_15521 No alias root phototropism protein 3 0.05 Orthogroups_2024-Update
A4A49_18800 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
A4A49_24985 No alias root phototropism protein 2 0.1 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.07 Orthogroups_2024-Update
At5g10250 No alias Phototropic-responsive NPH3 family protein... 0.02 Orthogroups_2024-Update
At5g67440 No alias BTB/POZ domain-containing protein NPY3... 0.05 Orthogroups_2024-Update
Bradi1g13890 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi3g46480 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi4g03397 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi4g25900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi4g30480 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Brara.C01564.1 No alias phototropin signalling factor *(RPT2) 0.04 Orthogroups_2024-Update
Brara.D01192.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.06 Orthogroups_2024-Update
Brara.F02310.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I00775.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Brara.I05548.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.02 Orthogroups_2024-Update
Brara.J00152.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
GRMZM2G169825 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.01G192300 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G153500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G237100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.05G105000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G281700 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.11G049800 No alias Phototropic-responsive NPH3 family protein 0.06 Orthogroups_2024-Update
Glyma.11G061200 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.11G200201 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.13G258700 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.13G320400 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G163500 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
HORVU4Hr1G023260.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
MA_10429476g0010 No alias (at5g67385 : 302.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
MA_479907g0010 No alias (at5g64330 : 649.0) Involved in blue light response... 0.03 Orthogroups_2024-Update
MA_7675g0010 No alias (at5g48800 : 618.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Mp5g07060.1 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Orthogroups_2024-Update
PSME_00048851-RA No alias (at1g30440 : 630.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00049816-RA No alias (at1g67900 : 654.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.007G093000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.010G223600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Pp1s53_256V6 No alias root phototropism 0.05 Orthogroups_2024-Update
Pp1s67_83V6 No alias protein binding 0.02 Orthogroups_2024-Update
Seita.7G303000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G303100.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Seita.8G012100.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G015200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G026800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc05g051580 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.05 Orthogroups_2024-Update
Sopen05g008470 No alias NPH3 family 0.07 Orthogroups_2024-Update
Sopen05g030030 No alias NPH3 family 0.06 Orthogroups_2024-Update
Sopen07g022670 No alias NPH3 family 0.18 Orthogroups_2024-Update
Sopen10g035520 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 184 438
IPR000210 BTB/POZ_dom 24 114
No external refs found!