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  5. LOC_Os02g51310

LOC_Os02g51310


Description : TCP family transcription factor, putative, expressed


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g51310
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
Brara.B01816.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C00326.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K00447.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g43760 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.010G130200 No alias TCP domain protein 12 0.02 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.019G091300 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Seita.3G181900.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G322500.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Seita.5G327600.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc06g069240 No alias branched1b 0.02 Orthogroups_2024-Update
Sopen02g033790 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 76 122
No external refs found!