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  5. LOC_Os02g51570

LOC_Os02g51570


Description : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed


Gene families : OG_42_0004076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g51570
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
At4g39710 No alias Photosynthetic NDH subunit of lumenal location 4,... 0.02 Orthogroups_2024-Update
Brara.A00046.1 No alias component *(PnsL4) of NDH lumen subcomplex L &... 0.03 Orthogroups_2024-Update
Glyma.08G139100 No alias FK506-binding protein 16-2 0.03 Orthogroups_2024-Update
Potri.001G075500 No alias FK506-binding protein 13 0.03 Orthogroups_2024-Update
Potri.005G079700 No alias FK506-binding protein 16-2 0.03 Orthogroups_2024-Update
Seita.1G322800.1 No alias component *(PnsL4) of NDH lumen subcomplex L &... 0.04 Orthogroups_2024-Update
Sobic.010G219500.2 No alias peptidyl-prolyl cis-trans isomerase *(FKBP13) 0.03 Orthogroups_2024-Update
Sopen08g002500 No alias FKBP-type peptidyl-prolyl cis-trans isomerase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 127 225
No external refs found!