Description : SKIP/SNW domain containing protein, expressed
Gene families : OG_42_0002827 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002827_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os02g52250 | |
Cluster | HCCA clusters: cluster_0051 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_05936 | No alias | snwski-interacting protein | 0.02 | Orthogroups_2024-Update | |
Glyma.01G008600 | No alias | chromatin protein family | 0.02 | Orthogroups_2024-Update | |
Glyma.16G077700 | No alias | chromatin protein family | 0.03 | Orthogroups_2024-Update | |
Solyc12g008370 | No alias | SNW domain-containing 1 (AHRD V3.3 *** A0A0B0PGB0_GOSAR) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | InterProScan predictions |
CC | GO:0005681 | spliceosomal complex | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
MF | GO:0008289 | lipid binding | IEP | Predicted GO |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004015 | SKI-int_prot_SKIP_SNW-dom | 191 | 350 |
No external refs found! |