1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g043250

Solyc07g043250


Description : LOW QUALITY:VQ motif-containing protein, putative (AHRD V3.3 *-* A0A061DVP3_THECC)


Gene families : OG_42_0000723 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g043250
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
A4A49_15906 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Bradi1g32060 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
LOC_Os02g07690 No alias VQ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G158800 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Potri.006G006300 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Seita.1G070200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G268900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G058000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 50 77
No external refs found!