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  5. Solyc07g043270

Solyc07g043270


Description : FAR1 (AHRD V3.3 *** A0A178UYQ0_ARATH)


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g043270
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
At2g32250 No alias Protein FAR1-RELATED SEQUENCE 2... 0.02 Orthogroups_2024-Update
Glyma.01G202800 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.04G193200 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os05g03800 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sobic.001G195550.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sopen00g012080 No alias MULE transposase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006023 aminoglycan biosynthetic process IEP Predicted GO
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predicted GO
BP GO:0006029 proteoglycan metabolic process IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0009100 glycoprotein metabolic process IEP Predicted GO
BP GO:0009101 glycoprotein biosynthetic process IEP Predicted GO
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0030166 proteoglycan biosynthetic process IEP Predicted GO
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 291 383
IPR007527 Znf_SWIM 579 604
IPR004330 FAR1_DNA_bnd_dom 91 193
No external refs found!