1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g52700

LOC_Os02g52700


Description : alpha-amylase precursor, putative, expressed


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g52700
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
Brara.A02054.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
HORVU6Hr1G080790.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
LOC_Os04g33040 No alias alpha-amylase precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g22820.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Potri.010G092900 No alias alpha-amylase-like 3 0.02 Orthogroups_2024-Update
Sobic.006G063600.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Sopen03g025640 No alias Alpha-amylase C-terminal beta-sheet domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 50 211
IPR012850 A-amylase_bs_C 368 426
No external refs found!