- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : DEAD-box ATP-dependent RNA helicase, putative, expressed
Gene families : OG_42_0000769 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os02g54020 | |
| Cluster | HCCA clusters: cluster_0049 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sopen01g043800 | No alias | Helicase conserved C-terminal domain | 0.03 | Orthogroups_2024-Update | |
| Sopen01g046350 | No alias | Helicase conserved C-terminal domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032284 | RecQ_Zn-bd | 64 | 136 |
| No external refs found! |