Description : polygalacturonase, putative, expressed
Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os02g54030 | |
Cluster | HCCA clusters: cluster_0049 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g53430 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G348602 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Solyc05g049980 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000502 | proteasome complex | IEP | Predicted GO |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
BP | GO:0009894 | regulation of catabolic process | IEP | Predicted GO |
BP | GO:0042176 | regulation of protein catabolic process | IEP | Predicted GO |
CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
CC | GO:1905369 | endopeptidase complex | IEP | Predicted GO |
MF | GO:2001070 | starch binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 4 | 234 |
No external refs found! |