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  5. LOC_Os02g54110

LOC_Os02g54110


Description : expressed protein


Gene families : OG_42_0003160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g54110
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
Brara.C01737.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G082340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g007950 No alias NUC173 domain 0.02 Orthogroups_2024-Update
Sopen07g021980 No alias NUC173 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 411 609
No external refs found!