LOC_Os02g54160

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g54160
Cluster	HCCA clusters: cluster_0035

Target	Alias	Description	ECC score	Gene Family Method
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_23010	No alias	ethylene-responsive transcription factor 2	0.02	Orthogroups_2024-Update
A4A49_40092	No alias	ethylene-responsive transcription factor crf2	0.02	Orthogroups_2024-Update
At1g72360	No alias	Integrase-type DNA-binding superfamily protein...	0.02	Orthogroups_2024-Update
At1g77640	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Orthogroups_2024-Update
At2g47520	No alias	Ethylene-responsive transcription factor ERF071...	0.02	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.02	Orthogroups_2024-Update
Bradi2g29960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Brara.A00880.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.A02830.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.E00145.1	No alias	subgroup ERF-VI transcription factor & transcription...	0.01	Orthogroups_2024-Update
Brara.F02040.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.J02216.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.K00197.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
GRMZM2G018398	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
GRMZM2G110333	No alias	related to AP2 12	0.04	Orthogroups_2024-Update
GRMZM2G119865	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
GRMZM2G156737	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.13G088100	No alias	related to AP2 4	0.01	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G082880.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
MA_10432141g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_113446g0010	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_115348g0020	No alias	(at4g17500 : 116.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_42369g0010	No alias	(at5g07580 : 93.2) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00008358-RA	No alias	(at5g21960 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00016017-RA	No alias	(at5g25190 : 150.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00023817-RA	No alias	(at5g05410 : 117.0) Encodes a transcription factor that...	0.02	Orthogroups_2024-Update
PSME_00032194-RA	No alias	(at4g17500 : 100.0) Encodes a member of the ERF...	0.01	Orthogroups_2024-Update
PSME_00050761-RA	No alias	(at1g15360 : 129.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G004700	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Potri.001G110500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G071666	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
Potri.003G121200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.03	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Pp1s340_16V6	No alias	ethylene-responsive transcription	0.02	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Seita.9G038700.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G481300.1	No alias	subgroup ERF-VII transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G324500.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.02	Orthogroups_2024-Update
Solyc06g068830	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc07g042230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.02	Orthogroups_2024-Update
Solyc07g053740	No alias	Ethylene Response Factor F.4	0.02	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g028640	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
CC	GO:0005956	protein kinase CK2 complex	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006289	nucleotide-excision repair	IEP	Predicted GO
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
MF	GO:0019207	kinase regulator activity	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO
MF	GO:0019887	protein kinase regulator activity	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
BP	GO:0030163	protein catabolic process	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
CC	GO:0098588	bounding membrane of organelle	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	120	168

External Links

No external refs found!

LOC_Os02g54160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation