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  5. Solyc07g043640

Solyc07g043640


Description : AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g043640
Cluster HCCA clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
At1g21530 No alias Probable acyl-activating enzyme 10... 0.03 Orthogroups_2024-Update
Brara.G00260.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G110616 No alias acyl activating enzyme 1 0.03 Orthogroups_2024-Update
Glyma.02G042200 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
LOC_Os03g03790 No alias AMP-binding domain containing protein, expressed 0.04 Orthogroups_2024-Update
Potri.004G082000 No alias benzoyloxyglucosinolate 1 0.03 Orthogroups_2024-Update
Potri.006G036300 No alias AMP-dependent synthetase and ligase family protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 488 563
IPR000873 AMP-dep_Synth/Lig 56 479
No external refs found!