LOC_Os02g56250

Description : GATA zinc finger domain containing protein, expressed

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g56250
Cluster	HCCA clusters: cluster_0133

Target	Alias	Description	ECC score	Gene Family Method
A4A49_09786	No alias	gata transcription factor 2	0.02	Orthogroups_2024-Update
A4A49_15701	No alias	gata transcription factor 1	0.02	Orthogroups_2024-Update
A4A49_32617	No alias	gata transcription factor 15	0.03	Orthogroups_2024-Update
At3g50870	No alias	GATA transcription factor 18...	0.02	Orthogroups_2024-Update
Brara.B03483.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C03928.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.G01368.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
GRMZM2G031983	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G379005	No alias	GATA transcription factor 12	0.04	Orthogroups_2024-Update
HORVU5Hr1G116310.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
PSME_00001982-RA	No alias	(at5g25830 : 153.0) Encodes a member of the GATA factor...	0.02	Orthogroups_2024-Update
PSME_00046739-RA	No alias	(at2g45050 : 155.0) Encodes a member of the GATA factor...	0.03	Orthogroups_2024-Update
PSME_00050760-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Potri.018G053600	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
Seita.3G175200.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Seita.9G542200.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Sobic.004G301100.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
Solyc01g110310	No alias	GATA transcription factor (AHRD V3.3 *** K4B3P4_SOLLC)	0.03	Orthogroups_2024-Update
Solyc02g062380	No alias	voltage dependent anion channel 2 (AHRD V3.3 --* AT5G67500.3)	0.03	Orthogroups_2024-Update
Sopen02g029260	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0006743	ubiquinone metabolic process	IEP	Predicted GO
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0016272	prefoldin complex	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019211	phosphatase activator activity	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0042180	cellular ketone metabolic process	IEP	Predicted GO
BP	GO:0042181	ketone biosynthetic process	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048580	regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0050793	regulation of developmental process	IEP	Predicted GO
BP	GO:0051094	positive regulation of developmental process	IEP	Predicted GO
BP	GO:0051239	regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO
BP	GO:1901661	quinone metabolic process	IEP	Predicted GO
BP	GO:1901663	quinone biosynthetic process	IEP	Predicted GO
BP	GO:2000026	regulation of multicellular organismal development	IEP	Predicted GO
BP	GO:2000038	regulation of stomatal complex development	IEP	Predicted GO
BP	GO:2000123	positive regulation of stomatal complex development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	335	368

External Links

No external refs found!

LOC_Os02g56250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation