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  5. LOC_Os02g56280

LOC_Os02g56280


Description : zinc finger family protein, putative, expressed


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g56280
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
Cre09.g395843 No alias Zinc finger (C3HC4-type RING finger) family protein 0.01 Orthogroups_2024-Update
Glyma.01G097900 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.14G185600 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
MA_129331g0010 No alias (at5g60710 : 474.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
MA_218345g0010 No alias (at2g38970 : 115.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
Sobic.001G226800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G508466.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 95 124
IPR032838 Vwaint_dom 627 699
IPR002035 VWF_A 282 463
No external refs found!