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  5. LOC_Os02g56760

LOC_Os02g56760


Description : OsFBX66 - F-box domain containing protein, expressed


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g56760
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.9G408000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g099990 No alias F-box protein (AHRD V3.3 *** G7KWK0_MEDTR) 0.02 Orthogroups_2024-Update
Sopen12g033010 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 12 55
IPR025886 PP2-like 320 483
IPR025886 PP2-like 105 271
No external refs found!