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  5. LOC_Os02g56820

LOC_Os02g56820


Description : OsFBX69 - F-box domain containing protein, expressed


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g56820
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
A4A49_31344 No alias f-box protein 0.03 Orthogroups_2024-Update
Bradi1g48275 No alias phloem protein 2-B11 0.02 Orthogroups_2024-Update
MA_10429303g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10429303g0020 No alias (at1g80110 : 157.0) phloem protein 2-B11 (PP2-B11);... 0.02 Orthogroups_2024-Update
Sobic.004G340900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen12g032710 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
CC GO:0000818 nuclear MIS12/MIND complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 233 374
IPR025886 PP2-like 99 219
IPR025886 PP2-like 475 626
No external refs found!