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  5. LOC_Os02g56840

LOC_Os02g56840


Description : OsFBX70 - F-box domain containing protein, expressed


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g56840
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
271662 No alias phloem protein 2-A15 0.02 Orthogroups_2024-Update
Bradi2g00250 No alias phloem protein 2-A1 0.02 Orthogroups_2024-Update
Bradi3g55020 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
Brara.H00998.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_134768g0010 No alias (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11);... 0.02 Orthogroups_2024-Update
PSME_00005739-RA No alias (at2g02240 : 199.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
Seita.8G123700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G408000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g100000 No alias F-box protein (AHRD V3.3 *** W9RMP6_9ROSA) 0.03 Orthogroups_2024-Update
Sopen01g043520 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 103 292
No external refs found!