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  5. LOC_Os02g57550

LOC_Os02g57550


Description : ZOS2-18 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g57550
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
At5g10970 No alias C2H2 and C2HC zinc fingers superfamily protein... 0.02 Orthogroups_2024-Update
Bradi1g68570 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Brara.D02553.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.I00553.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G295500 No alias zinc finger protein 6 0.02 Orthogroups_2024-Update
LOC_Os11g48000 No alias ZOS11-11 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G041700 No alias zinc finger protein 11 0.02 Orthogroups_2024-Update
Seita.2G213700.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!