1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g57820

LOC_Os02g57820


Description : AT hook motif domain containing protein, expressed


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g57820
Cluster HCCA clusters: cluster_0091

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g02490 No alias AT hook motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp8g14640.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Potri.014G070000 No alias AT-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Seita.8G030500.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G035000.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Sopen03g003140 No alias Domain of unknown function (DUF296) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 211 325
No external refs found!