1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g01130

LOC_Os03g01130


Description : ethylene-responsive element-binding protein, putative, expressed


Gene families : OG_42_0000597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g01130
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
A4A49_11641 No alias desi-like protein 0.03 Orthogroups_2024-Update
A4A49_62013 No alias desi-like protein 0.03 Orthogroups_2024-Update
At1g47740 No alias PPPDE putative thiol peptidase family protein... 0.04 Orthogroups_2024-Update
GRMZM2G005435 No alias PPPDE putative thiol peptidase family protein 0.02 Orthogroups_2024-Update
GRMZM2G073979 No alias PPPDE putative thiol peptidase family protein 0.03 Orthogroups_2024-Update
Glyma.05G063000 No alias PPPDE putative thiol peptidase family protein 0.03 Orthogroups_2024-Update
Glyma.09G114100 No alias PPPDE putative thiol peptidase family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G009550.3 No alias deubiquitinase 0.03 Orthogroups_2024-Update
Solyc12g006880 No alias PPPDE thiol peptidase family protein, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 49 183
No external refs found!