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  5. LOC_Os03g03164

LOC_Os03g03164


Description : homeobox protein knotted-1, putative, expressed


Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g03164
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
415291 No alias KNOTTED-like from Arabidopsis thaliana 0.02 Orthogroups_2024-Update
At1g62990 No alias Homeobox protein knotted-1-like 7... 0.02 Orthogroups_2024-Update
At4g08150 No alias Homeobox protein knotted-1-like 1... 0.02 Orthogroups_2024-Update
Bradi1g76970 No alias KNOTTED-like homeobox of Arabidopsis thaliana 7 0.08 Orthogroups_2024-Update
Brara.B01915.1 No alias KNOX-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F02723.1 No alias KNOX-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H02211.1 No alias KNOX-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I01459.1 No alias KNOX-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03233.1 No alias KNOX-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G017087 No alias KNOTTED-like from Arabidopsis thaliana 0.02 Orthogroups_2024-Update
GRMZM2G159431 No alias KNOTTED-like homeobox of Arabidopsis thaliana 7 0.02 Orthogroups_2024-Update
Glyma.04G064100 No alias KNOTTED1-like homeobox gene 3 0.03 Orthogroups_2024-Update
Glyma.09G095700 No alias KNOTTED1-like homeobox gene 3 0.02 Orthogroups_2024-Update
Glyma.11G027100 No alias KNOTTED-like homeobox of Arabidopsis thaliana 7 0.02 Orthogroups_2024-Update
Glyma.13G157300 No alias KNOTTED1-like homeobox gene 3 0.03 Orthogroups_2024-Update
Glyma.17G104800 No alias KNOTTED1-like homeobox gene 3 0.02 Orthogroups_2024-Update
Glyma.17G215500 No alias KNOTTED1-like homeobox gene 3 0.02 Orthogroups_2024-Update
PSME_00000683-RA No alias (at5g11060 : 216.0) A member of Class II KN1-like... 0.03 Orthogroups_2024-Update
PSME_00033424-RA No alias (at4g08150 : 121.0) A member of class I knotted1-like... 0.02 Orthogroups_2024-Update
PSME_00033425-RA No alias (o04135|knap2_maldo : 176.0) Homeobox protein... 0.02 Orthogroups_2024-Update
Pp1s154_83V6 No alias knat3 homeodomain protein 0.02 Orthogroups_2024-Update
Pp1s77_59V6 No alias knat3 homeodomain protein 0.02 Orthogroups_2024-Update
Seita.3G050400.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G106200.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Solyc07g007120 No alias class II knotted-like homeodomain protein 0.03 Orthogroups_2024-Update
Solyc08g041820 No alias Homeobox protein knotted-1, putative (AHRD V3.3 *** B9RNZ6_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 258 297
IPR005540 KNOX1 53 93
IPR005541 KNOX2 109 160
No external refs found!