LOC_Os03g03260

Description : homeobox domain containing protein, expressed

Gene families : OG_42_0000158 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g03260
Cluster	HCCA clusters: cluster_0049

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05176	No alias	bel1-like homeodomain protein 1	0.02	Orthogroups_2024-Update
A4A49_41791	No alias	bel1-like homeodomain protein 9	0.03	Orthogroups_2024-Update
At1g75430	No alias	Uncharacterized protein At1g75430 (Fragment)...	0.03	Orthogroups_2024-Update
At4g36870	No alias	BEL1-like homeodomain protein 2...	0.02	Orthogroups_2024-Update
Bradi1g09615	No alias	BEL1-like homeodomain 2	0.04	Orthogroups_2024-Update
Bradi1g12520	No alias	BEL1-like homeodomain 10	0.02	Orthogroups_2024-Update
Bradi1g74060	No alias	BEL1-like homeodomain 6	0.02	Orthogroups_2024-Update
Bradi3g32040	No alias	BEL1-like homeodomain 2	0.02	Orthogroups_2024-Update
Bradi4g25022	No alias	BEL1-like homeodomain 7	0.02	Orthogroups_2024-Update
Brara.F01395.1	No alias	BEL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G03349.1	No alias	BEL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K00337.1	No alias	BEL-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G074645	No alias	POX (plant homeobox) family protein	0.02	Orthogroups_2024-Update
Glyma.06G029100	No alias	BEL1-like homeodomain 3	0.02	Orthogroups_2024-Update
Glyma.16G142800	No alias	BEL1-like homeodomain 2	0.02	Orthogroups_2024-Update
HORVU4Hr1G084590.2	No alias	BEL-type transcription factor	0.03	Orthogroups_2024-Update
Pp1s52_231V6	No alias	homeodomain transcription factor	0.02	Orthogroups_2024-Update
Sopen01g052170	No alias	Associated with HOX	0.02	Orthogroups_2024-Update
Sopen04g034380	No alias	Associated with HOX	0.02	Orthogroups_2024-Update
evm.model.contig_3495.4	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
BP	GO:0017004	cytochrome complex assembly	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006563	POX_dom	144	272
IPR008422	Homeobox_KN_domain	342	381

External Links

No external refs found!

LOC_Os03g03260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation