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  5. LOC_Os03g03500

LOC_Os03g03500


Description : heavy metal-associated domain containing protein, expressed


Gene families : OG_42_0000282 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g03500
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
At5g23760 No alias At5g23760 [Source:UniProtKB/TrEMBL;Acc:Q2HIM4] 0.03 Orthogroups_2024-Update
Brara.I05608.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.10G230600 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G118110.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.002G163400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Sobic.006G251400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g095070 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 8 59
No external refs found!