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  5. LOC_Os03g04120

LOC_Os03g04120


Description : AMP-binding enzyme, putative, expressed


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g04120
Cluster HCCA clusters: cluster_0122

Target Alias Description ECC score Gene Family Method Actions
A4A49_01001 No alias acetatebutyrate--coa ligase aae7, peroxisomal 0.02 Orthogroups_2024-Update
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.03 Orthogroups_2024-Update
At3g16910 No alias Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 Orthogroups_2024-Update
Glyma.14G208200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
PSME_00040387-RA No alias (at3g16910 : 749.0) Encodes a peroxisomal protein with... 0.03 Orthogroups_2024-Update
PSME_00057252-RA No alias (at1g65880 : 600.0) Encodes a benzoate-CoA ligase.... 0.02 Orthogroups_2024-Update
Sobic.010G130800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc08g075810 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 20 443
IPR025110 AMP-bd_C 452 526
No external refs found!