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  5. LOC_Os03g04130

LOC_Os03g04130


Description : AMP-binding domain containing protein, expressed


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g04130
Cluster HCCA clusters: cluster_0090

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G075417 No alias acyl activating enzyme 12 0.02 Orthogroups_2024-Update
LOC_Os09g38350 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.004G082000 No alias benzoyloxyglucosinolate 1 0.02 Orthogroups_2024-Update
Pp1s7_313V6 No alias amp dependent 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 551 625
IPR000873 AMP-dep_Synth/Lig 118 542
No external refs found!