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  5. Solyc07g045200

Solyc07g045200


Description : LOW QUALITY:serine-rich protein-like protein (AHRD V3.3 *-* AT5G55980.1)


Gene families : OG_42_0000746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000746_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g045200
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G071880.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_158372g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc05g013560 No alias serine-rich protein-like protein (AHRD V3.3 *-* AT5G55980.1) 0.03 Orthogroups_2024-Update
Sopen12g002170 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!